Technology
Publications
[DeepNeo] Nature Genetics, 2023
MHC II immunogenicity shapes the neoepitope landscape in human tumors
[DeepNeo] Nature Communications, 2020
Predicting clinical benefit of immunotherapy by antigenic or functional mutations affecting tumour immunogenicity
[DeepNeo] Nucleic Acids Research, 2023
DeepNeo: a webserver for predicting immunogenic neoantigens
DeepNeo
Science Advances, 2025
B cell-reactive neoantigens boost anti-tumor immunity
DeepNeo
Nature Genetics, 2023
MHC II immunogenicity shapes the neoepitope landscape in human tumors
LinkDeepNeo
Nature Communications, 2020
Predicting clinical benefit of immunotherapy by antigenic or functional mutations affecting tumour immunogenicity
LinkDeepDependency
Clinical and Translational Medicine, 2022
Gene essentiality for tumour growth influences neoantigen-directed immunoediting
LinkDeepDependency
Genome Biology, 2020
Computational inference of cancer-specific vulnerabilities in clinical samples
LinkData warehouse
Nature Communications, 2024
Systematic dissection of tumor-normal single-cell ecosystems across a thousand tumors of 30 cancer types
LinkData warehouse
Nature Biotechnology, 2023
Single-cell mapping of combinatorial target antigens for CAR switches using logic gates
LinkIO CDx
Nature Cancer, 2023
Integrative analysis of risk factors for immune-related adverse events of checkpoint blockade therapy in cancer
LinkIO CDx
Nature Communications, 2019
DNA methylation loss promotes immune evasion of tumours with high mutation and copy number load
Link| Technology | Journal | Paper Title | Link |
|---|---|---|---|
| DeepNeo | Science Advances, 2025 | B cell-reactive neoantigens boost anti-tumor immunity | |
| DeepNeo | Nucleic Acids Research, 2023 | DeepNeo: a webserver for predicting immunogenic neoantigens | Link |
| DeepNeo | Nature Genetics, 2023 | MHC II immunogenicity shapes the neoepitope landscape in human tumors | Link |
| DeepNeo | Nature Communications, 2020 | Predicting clinical benefit of immunotherapy by antigenic or functional mutations affecting tumour immunogenicity | Link |
| DeepDependency | Clinical and Translational Medicine, 2022 | Gene essentiality for tumour growth influences neoantigen-directed immunoediting | Link |
| DeepDependency | Genome Biology, 2020 | Computational inference of cancer-specific vulnerabilities in clinical samples | Link |
| Data warehouse | Nature Communications, 2024 | Systematic dissection of tumor-normal single-cell ecosystems across a thousand tumors of 30 cancer types | Link |
| Data warehouse | Nature Biotechnology, 2023 | Single-cell mapping of combinatorial target antigens for CAR switches using logic gates | Link |
| IO CDx | Nature Cancer, 2023 | Integrative analysis of risk factors for immune-related adverse events of checkpoint blockade therapy in cancer | Link |
| IO CDx | Nature Communications, 2019 | DNA methylation loss promotes immune evasion of tumours with high mutation and copy number load | Link |
