Technology

Publications

  • [DeepNeo] Nature Genetics, 2023

    MHC II immunogenicity shapes the neoepitope landscape in human tumors

  • [DeepNeo] Nature Communications, 2020

    Predicting clinical benefit of immunotherapy by antigenic or functional mutations affecting tumour immunogenicity

  • [DeepNeo] Nucleic Acids Research, 2023

    DeepNeo: a webserver for predicting immunogenic neoantigens

DeepNeo

Science Advances, 2025

B cell-reactive neoantigens boost anti-tumor immunity

DeepNeo

Nucleic Acids Research, 2023

DeepNeo: a webserver for predicting immunogenic neoantigens

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DeepNeo

Nature Genetics, 2023

MHC II immunogenicity shapes the neoepitope landscape in human tumors

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DeepNeo

Nature Communications, 2020

Predicting clinical benefit of immunotherapy by antigenic or functional mutations affecting tumour immunogenicity

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DeepDependency

Clinical and Translational Medicine, 2022

Gene essentiality for tumour growth influences neoantigen-directed immunoediting

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DeepDependency

Genome Biology, 2020

Computational inference of cancer-specific vulnerabilities in clinical samples

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Data warehouse

Nature Communications, 2024

Systematic dissection of tumor-normal single-cell ecosystems across a thousand tumors of 30 cancer types

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Data warehouse

Nature Biotechnology, 2023

Single-cell mapping of combinatorial target antigens for CAR switches using logic gates

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IO CDx

Nature Cancer, 2023

Integrative analysis of risk factors for immune-related adverse events of checkpoint blockade therapy in cancer

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IO CDx

Nature Communications, 2019

DNA methylation loss promotes immune evasion of tumours with high mutation and copy number load

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